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Separating measurement and expression models clarifies confusion in single-cell RNA sequencing analysis.
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Chen, Mengjie
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Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis.
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Early X chromosome inactivation during human preimplantation development revealed by single-cell RNA-sequencing.
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GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membership.
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High-throughput RNA sequencing of paraformaldehyde-fixed single cells.
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Single-cell barcoding and sequencing using droplet microfluidics.
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BASIC: BCR assembly from single cells.
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Tracing the origin of disseminated tumor cells in breast cancer using single-cell sequencing.
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Stephens, Matthew
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VIPER: variability-preserving imputation for accurate gene expression recovery in single-cell RNA sequencing studies.
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CD4+ teff cell heterogeneity: the perspective from single-cell transcriptomics.
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Demystifying "drop-outs" in single-cell UMI data.
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Nakamura, Yusuke
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Gilad, Yoav
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